Details of xml schema: SBGN, SBGNML, SBML and CellDesigner.

Atherosclerosis

From Parton et al., Bioinformatics (2018, in press).

• Pathway map (SBGN-ML) and Pathway map+model (SBML+CellDesigner)

Cholesterol metabolism

The cholesterol and vitamin D biosynthesis pathways. From Warren et al., Cells 2021, 10(8), 2007.

• Pathway map (SBGN-ML) and Newt file for the Newt pathway editor, file here.

The mevalonate arm of the cholesterol biosynthesis pathway. From Benson et al., British Journal of Pharmacology, Volume 174, Issue 23, Pages 4362-4382, 2017.

• Pathway map (SBGN-ML) and Pathway map+model (SBML+CellDesigner)

The pre-Squalene section of the cholesterol biosynthesis pathway. From Mazein et al., Biochemical Pharmacology 86: 1. 56-66 (2013).

• Pathway map (SBML+CellDesigner).

The sterol section of the cholesterol biosynthesis pathway (Shunt, Bloch and Kandutsch-Russell arms). From Mazein et al., Biochemical Pharmacology 86: 1. 56-66 (2013).

• Pathway map (SBML+CellDesigner).

A simplified model of the cholesterol biosynthesis pathway. From Watterson et al., Biochimie 95, 613-21 (2013).

• Pathway map+model (SBML+CellDesigner).

Flat maps (images)

Regulation and feedback of cholesterol metabolism. From Mazein et al., Nature Precedings

• Pathway map (pdf)

Oxysterol metabolism and regulation. From Giotti, Figshare

• Pathway map (pdf)

Regulation of HMGCR in the mevalonte pathway. From Pappa, Figshare

• Pathway map (pdf)

The Vitamin D3 Synthesis Pathway. From Lu, Figshare

• Pathway map (pdf)